开启我们的生命+代码
index.html左右互换后，右下角栏的间距未调整前代码
<!--决定采用的简洁版本-->
<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<meta name="Keywords" content="Artocarpus">
<meta name="Description" content="genomic database">
<script type="text/javascript" src="javascript/logoLink.js"></script>
<link href="css/dropdown.css" rel="stylesheet" type="text/css">
<link href="css/style.css" rel="stylesheet" type="text/css">
<link href="css/popup.css" rel="stylesheet" type="text/css">
<!-- <link href="css/buttonstyle.css" rel="stylesheet" type="text/css"> -->
<link href="css/buttonstyle_78935d.css" rel="stylesheet" type="text/css">
<link href="css/theme.css" rel="stylesheet" type="text/css">
<script type="text/javascript" src="javascript/menu-loader.js"></script>
<title>ArtocarpusGD - a portal database of Artocarpus multi-omics data</title>
<script language="JavaScript">
function displaySubMenu(li) {
var subMenu = li.getElementsByTagName("ul")[0];
subMenu.style.display = "block";
}
function hideSubMenu(li) {
var subMenu = li.getElementsByTagName("ul")[0];
subMenu.style.display = "none";
}
// 添加搜索处理函数
function handleSearch() {
var form = document.getElementById("search-form");
var siteSearch = document.querySelector('input[name="sitesearch"]:checked').value !== "";
if (siteSearch) {
// 使用站内搜索
form.action = "/cgi-bin/Artocarpus/simple-search.cgi";
form.target = "_self"; // 在当前窗口打开结果
} else {
// 使用Google搜索
form.action = "https://www.google.com/search";
form.target = "_blank"; // 在新窗口打开结果
}
form.submit();
return true;
}
// 添加News隐藏/显示功能
function toggleNews() {
var newsContent = document.getElementById("newsContent");
var toggleButton = document.getElementById("newsToggle");
if (newsContent.style.display === "none") {
newsContent.style.display = "block";
toggleButton.innerHTML = "[Hide]";
} else {
newsContent.style.display = "none";
toggleButton.innerHTML = "[Show]";
}
}
</script>
</head>
<body>
<table width="100%" cellspacing="0" cellpadding="0" bgcolor="#fff">
<tr bgcolor="#B3C2C7">
<td align="center" height="60"><map name="FPMap0">
<area href="/Artocarpus/index.html" shape="rect" coords="42, 2, 342, 59"></map>
<img usemap="#FPMap0" runat="server" src="images/logo.gif" hspace="0" vspace="0" border="0" width="1200" height="60">
</td></tr>
<tr><td><hr></td></tr>
<tr>
<td class="menu" align="center" height="30"><table width="1200px"><tr><td>
<div class="nav">
<ul>
<li><a href="index.html">Home</a> </li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="#">Genome</a>
<ul>
<li><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArAl"><i>Artocarpus altilis</i></a></li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArHeCHN2"><i>Artocarpus heterophyllus</i></a>
<ul>
<li><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArHeCHN2">S10</a></li>
</ul>
</li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArHe"><i>Artocarpus heterophyllus</i></a>
<ul>
<li><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArHe">ICRAFF_11314</a></li>
</ul>
</li>
<li><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArHi"><i>Artocarpus hirsutus</i></a></li>
<li><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArNa"><i>Artocarpus nanchuanensis</i></a></li>
<li><a href="../../cgi-bin/Artocarpus/genome.cgi?ID=ArCa"><i>Artocarpus camansi</i></a></li>
</ul>
</li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="#">Expression</a>
<ul>
<li><a href="RNA-seq.htm">RNA-seq</a></li>
</ul>
</li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="#">Tools</a>
<ul>
<li><a href="search.htm">Search</a></li>
<li><a href="batchsearch.htm">Batch Search</a></li>
<li><a href="sequenceserver_blast.htm">BLAST</a></li>
<li><a href="jbrowse.htm">JBrowse</a></li>
<li><a href="GO_enrichment.htm">GO enrichment</a></li>
<li><a href="KEGG_enrichment.htm">KEGG enrichment</a></li>
<li><a href="TPS_Family.htm">TPS Family</a></li>
<li><a href="MISAweb.htm">MISAweb</a></li>
<li><a href="primer3.htm">Primer3</a></li>
</ul>
</li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="#">Document</a>
<ul>
<li><a href="statistics.htm">Statistics</a></li>
<li><a href="link.htm">Resources</a></li>
</ul>
</li>
<li onmouseover="displaySubMenu(this)" onmouseout="hideSubMenu(this)"><a href="#">Community</a>
<ul>
<li><a href="manual.htm">Manual</a></li>
<li><a href="feedback.htm">Feedback</a></li>
<li><a href="download.htm">Download</a>
</ul>
</li>
</ul></div></td></tr></table>
</td>
</tr>
<tr><td align="center">
<table cellpadding="0" bordercolorlight="#C0C0C0" cellspacing="15px" bgcolor="#EEEEEE" border="0" width="1200px">
<tr><td align="center" colspan=2><img src="images/Artocarpus1.gif" border="0" width="1170px"></td></tr>
<tr><td valign="top" width="80%">
<table class="tableborder" width="100%" cellpadding="0" cellspacing="15px" bgcolor="#F5F5F5">
<tr><td><font style="font-family: inherit; font-size: 15px; font-weight:700">Introduction to </font>
<span style="font-weight: 700; font-size: 15px">Artocarpus</span></td></tr>
<tr><td><table class="tableborder" width="100%" cellpadding="0" cellspacing="10px" bgcolor="#ffffff" style="height: 180px; vertical-align: top;"><tr><td style="vertical-align: top;">
<p align="justify" style="text-indent: 2em;">
<i>Artocarpus</i> species, including jackfruit (<i>Artocarpus heterophyllus</i>) and breadfruit (<i>Artocarpus altilis</i>), and other members of the genus, are vital tropical plants that provide nutritious food and support millions of livelihoods. With over 60 species, they are important tropical plants that contribute to food security and sustainable agriculture. Rich in nutrients, they offer great potential for climate-resilient farming systems and agroforestry.
</p>
<p align="justify" style="text-indent: 2em;">
The <i>Artocarpus</i> Genome Database (ArtocarpusGD) provides high-quality genome sequences and functional annotations, including Gene Ontology and KEGG, along with links to GenBank and UniProt. It offers user-friendly tools like BLAST and JBrowse to explore the data, which is freely accessible and regularly updated to support research on genetic improvement and sustainable utilization of <i>Artocarpus</i> species.
</p>
</td></tr></table></td></tr>
<tr><td>
<font style="font-family: inherit; font-size: 15px; font-weight:700">Publications</font></td></tr>
<tr><td><table class="tableborder" width="100%" cellpadding="0" cellspacing="10px" bgcolor="#ffffff" style="height: 180px; vertical-align: top;">
<tr><td style="vertical-align: top;">
<p align="justify"><b> 1</b>. Lin X <i>et al.</i>, Jackfruit genome and population genomics provide
insights into fruit evolution and domestication history in China <i>Hortic Res.</i> <font color="#0066CC">2022</font>;9:uhac173.
[<a target="_blank" href="https://pubmed.ncbi.nlm.nih.gov/36204202/">PubMed</a>]. </p>
<p align="justify"><b> 2</b>. He J <i>et al.</i>, A chromosome-level genome assembly of <i>Artocarpus nanchuanensis</i> (Moraceae), an extremely endangered fruit tree. <i>Gigascience.</i> <font color="#0066CC">2022</font>;11:giac042.
[<a target="_blank" href="https://pubmed.ncbi.nlm.nih.gov/35701376/">PubMed</a>].</p>
<p align="justify"><b> 3</b>. Patil AB <i>et al.</i>, Jack of all trades: Genome assembly of Wild Jack and comparative genomics of <i>Artocarpus</i>.<i>Front Plant Sci.</i> <font color="#0066CC">2022</font>;13:1029540.
[<a target="_blank" href="https://pubmed.ncbi.nlm.nih.gov/36578332/">PubMed</a>]. </p>
<p align="justify"><b> 4</b>. Islam T <i>et al.</i>, Whole- genome sequencing of a year-round fruiting jackfruit (<i>Artocarpus heterophyllus</i> Lam.)
reveals high levels of single nucleotide variation. <i>Front Plant Sci.</i> <font color="#0066CC">2022</font>;13:1044420.
[<a target="_blank" href="https://pubmed.ncbi.nlm.nih.gov/36605965/">PubMed</a>].</p>
<p align="justify"><b> 5</b>. Sahu SK <i>et al.</i>, Draft genomes of two <i>Artocarpus</i> plants, Jackfruit
(<i>A. heterophyllus</i>) and Breadfruit (<i>A. altilis</i>). <i>Genes (Basel).</i> <font color="#0066CC">2019</font>;11(1):27.
[<a target="_blank" href="https://pubmed.ncbi.nlm.nih.gov/31878322/">PubMed</a>].</p>
<p align="justify"><b> 6</b>. Gardner EM <i>et al.</i>, Low-coverage, whole-genome sequencing of <i>Artocarpus camansi</i> (Moraceae) for phylogenetic marker
development and gene discovery. <i>Appl Plant Sci.</i> <font color="#0066CC">2016</font>;4(7):apps.1600017.
[<a target="_blank" href="https://pubmed.ncbi.nlm.nih.gov/27437173/">PubMed</a>]. </p>
</td></tr></table></td></tr>
<tr><td>
<font style="font-family: inherit; font-size: 15px; font-weight:700">News</font>
<span style="float: right; cursor: pointer; color: #78935d; font-size: 12px;" onclick="toggleNews()" id="newsToggle">[Hide]</span></td></tr>
<tr><td><table class="tableborder" width="100%" cellpadding="0" cellspacing="10px" bgcolor="#ffffff">
<tr><td>
<div id="newsContent" style="max-height: 280px; overflow-y: auto; overflow-x: hidden;">
<p align="justify"><b>01</b>. [<font color="#FF0000">Jan. 2025</font>]
The genomic data of seven genomes were all included into ArtocarpusGD!</p>
<p align="justify"><b>02</b>. [<font color="#FF0000">Apr. 2024</font>]
The genomic data of seven species were re-annotated with public databases and software,
and all annotated information were added into ArtocarpusGD! </p>
<p align="justify"><b>03</b>. [<font color="#FF0000">Mac. 2023</font>]
ArtocarpusGD is online now and welcome to access! </p>
<p align="justify"><b>04</b>. [<font color="#FF0000">Sep. 2022</font>] The Jackfruit (<i>Artocarpus heterophyllus</i>)
released a chromosome-level genome assembly provided
insights into fruit evolution and domestication history of China in the Journal of <i>Hortic Res.</i>.</p>
<p align="justify"><b>05</b>. [<font color="#FF0000">Nov. 2022</font>] The Nanchuan Breadfruit (<i>Artocarpus nanchuanensis</i>)
released a chromosome-level genome assembly in the Journal of <i>gigascience</i>.<br></p>
<p align="justify"><b>06</b>. [<font color="#FF0000">Dec. 2022</font>] The Wild Jack (<i>Artocarpus hirsutus</i>)
reported a genome assembly and comparative genomics of <i>Artocarpus</i> in the Journal of
<i>Front. Plant Sci.</i>. <br></p>
<p align="justify"><b>07</b>. [<font color="#FF0000">Dec. 2022</font>] The Jackfruit (<i>Artocarpus heterophyllus</i> Lam.)
reported a whole- genome sequencing of a year-round fruit
from Bangladesh in the Jouranl of
<i>Front. Plant Sci.</i> .</p>
<p align="justify"><b>08</b>. [<font color="#FF0000">Jun. 2019</font>] ArtocarpusGD containing 3 Artocarpus genomes is on line now <span lang="en-us">
and welcome to access!</p>
<p align="justify"><b>09</b>. [<font color="#FF0000">Nov.
2021</font>] The Jackfruit and Breadfruit (<i>Artocarpus heterophyllus</i> and <i>Artocarpus altilis</i>) released draft genomes assembly in the Journal of
<i>Genes.</i> </p>
<p align="justify"><b>10</b>. [<font color="#FF0000">Jun. 2019</font>] ArtocarpusGD is conceived to develop<span lang="en-us">
and one A</span>rtocarpus genome data were collected from public
databases!</p>
</div>
</td></tr></table></td></tr>
</table></td>
<td valign="top" align="right" width="20%">
<table class="tableborder" width="100%" cellpadding="0" cellspacing="15px" bgcolor="#F5F5F5">
<tr><td><font style="font-family: inherit; font-size: 15px; font-weight:700">Quick Navigation</font></td></tr>
<tr><td><table class="tableborder" width="100%" cellpadding="0" cellspacing="10px" bgcolor="#ffffff">
<tr><td style="vertical-align: top;">
<ul class="taxo" type="square">
<li class="litype"><a href="search.htm">Basic Search</a></li>
<li class="litype"><a href="sequenceserver_blast.htm">BLAST Search</a></li>
<li class="litype"><a href="jbrowse.htm">Quick Browse</a></li>
<li class="litype"><a href="statistics.htm">Data Statistics</a></li>
<li class="litype"><a href="download.htm">Data Download</a></li>
<li class="litype"><a href="RNA-seq.htm">Heatmap Show</a></li>
<li class="litype"><a href="synview.htm">Synteny Viewer</a></li>
</ul>
</td></tr></table> </td></tr>
<tr><td><font style="font-family: inherit; font-size: 15px; font-weight:700">Related links</font></td></tr>
<tr><td><table class="tableborder" width="100%" cellpadding="0" cellspacing="10px" bgcolor="#ffffff"><tr><td>
<ul class="taxo" type="square">
<li><a target="_blank" href="https://www.nature.com/nplants/ ">Natrue Plants</a></li>
<li><a target="_blank" href="https://www.cell.com/molecular-plant/home">Molecular Plant</a></li>
<li><a target="_blank" href="https://www.sciencedirect.com/science/bookseries/00652113">Advances in Agronomy</a></li>
<li><a target="_blank" href="https://www.journals.elsevier.com/food-chemistry">Food Chemistry</a></li>
<!--<li><a target="_blank" href="https://pubs.acs.org/journal/jafcau">Journal of Agricultural and Food Chemistry</a></li>-->
<li><a target="_blank" href="https://www.journals.elsevier.com/food-hydrocolloids">Food Hydrocolloids</a></li>
<li><a target="_blank" href="http://www.nature.com/hortres">Horticulture Research</a></li>
</ul>
<p></td></tr>
</table></td></tr></table>
</td>
</tr></table></td></tr>
<tr>
<td class="menu" style="padding-left:20px; padding-top:20px; padding-right:20px; padding-bottom:20px;" align="center">
<table cellpadding="0" cellspacing="15px" align="center" border="0" width="1200px" height="100%">
<tr><td align="left"><font color="#333333"><b>ArtocarpusGD</b> is developed by
<a href="mailto:hisunpeng@qfnu.edu.cn">Peng Sun</a> in Qufu Normal University, Qufu, 273165, P.R. China<br><br>
This website is compatible with <a target="_blank" href="https://www.google.com/chrome/">Chrome</a> and <a target="_blank" href="https://www.mozilla.org/en-US/firefox/new/">Firefox</a>  鲁ICP备2022010836号</font></td>
<td align="right"><img alt="logo" src="images/logo.png" width="80" border="0"></td></tr></table>
</td></tr>
</table>
</td>
</tr>
</table>
</body>
</html>