caseStudycase_study作图5的GH图

我建议你:

  • G(3S)-linalool biosynthesis pathway(pathway-level)
  • HReaction catalyzed by EC 4.2.3.25(reaction-level)

三、给你「可直接用」的 Figure legend(英文,投稿级别)

你可以直接复制,几乎不用改。

Figure X. Pathway- and reaction-level visualization of monoterpene biosynthesis in Artocarpus heterophyllus provided by ArtocarpusCYC.

(G) Pathway-level representation of the predicted (3S)-linalool biosynthesis pathway in Artocarpus heterophyllus S10, generated using the ArtocarpusCYC metabolic pathway database. Predicted enzymatic steps involved in the conversion from geranyl diphosphate to (3S)-linalool are highlighted, providing an overview of the monoterpene biosynthetic context.

(H) Reaction-level view of the enzymatic step catalyzed by EC 4.2.3.25, showing the chemical transformation from geranyl diphosphate to (3S)-linalool. This detailed representation illustrates the substrate–product relationship and reaction mechanism, demonstrating how individual biochemical reactions are integrated within the pathway framework.

如果你愿意稍微保守一点(Database 期刊更友好),可以把 predicted 再强调一次:

“predicted (3S)-linalool biosynthesis pathway”

四、Case study 中对应的 Results 段(配合这两张图)

这是你现在最该用的写法,已经完全是“数据库论文语气”,不是功能论文。

Pathway-level and reaction-level mapping of monoterpene biosynthesis

Using the ArtocarpusCYC module integrated in ArGD, a predicted monoterpene biosynthesis pathway corresponding to (3S)-linalool biosynthesis was identified in Artocarpus heterophyllus S10. The pathway-level visualization provides an overview of the metabolic context in which putative monoterpene synthase activities are involved (Figure XG).

To further illustrate the biochemical basis of this pathway, the key enzymatic reaction catalyzed by EC 4.2.3.25 was examined at the reaction level. The reaction view depicts the conversion of geranyl diphosphate to (3S)-linalool, highlighting the substrate–product relationship and chemical transformation underlying monoterpene formation (Figure XH). Together, these visualizations demonstrate the capability of ArtocarpusCYC to link predicted gene functions with curated metabolic pathways and individual biochemical reactions.