qw(CDD FunFam Gene3D PANTHER Pfam PRINTS SMART SUPERFAMILY); qw(CDD Gene3D MobiDBLite PANTHER Pfam PRINTS SMART SUPERFAMILY);

关于interpro注释时8个库选择的总结

Submitted by admin on Thu, 03/13/2025 - 14:21

#两次成功执行的八个库qw(CDD FunFam Gene3D PANTHER Pfam PRINTS SMART SUPERFAMILY);  qw(CDD Gene3D MobiDBLite PANTHER Pfam PRINTS SMART SUPERFAMILY);

#实际理论可尝试9种注释（CDD FunFam MobiDBLite Gene3D PANTHER Pfam PRINTS SMART SUPERFAMILY)

./interproscan.sh -t p -i 100.fasta -f TSV,gff3 -d ArHeCHN/ -appl Pfam,PANTHER,Gene3D,SMART,FunFam,MobiDBLite,CDD,SUPERFAMILY,PRINTS -goterms -iprlookup -cpu 8 > ArHeAnnot.log 2>&1

                ####9个库九库注释成功的执行脚本

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